I think i have mistaken some settings in policy comparison as WinVerifyTrust. It seems that there is no new setting for this (i mean a GPO setting), but still the registry change that is required (which can be done via Registry section of GPO, which we did). We are using REG_SZ (string) as this what was recommended on MS article at the point of implementing it. Qualys is still happy, so we are happy too. And it is working. Recently one new software vendor was having issues providing us newly built binaries with their toolset. Because they had some modifications in the padding and signature was missing. As WinVerifyTrust fix was done years ago and we didn't know what issues it can cause (nothing similar was reported in years), it was a mystery to figure out what is happening. Binary would look fine on our home PCs, but not when downloaded to a work PC. Which is curious, that home users are not protected from this. I wonder when MS will flip a switch on this one and build it into OS with updates.