Using Apple Pencil will shut down RD client when connecting to the remote computer. This situation happens after updating the app today.
Thanks for your comment John_Spencer - However I am not experiencing a crash when using my Apple Pencil while interacting with the Microsoft Remote App, it’s just it doesn’t work at all when being in my server. I have now to move my cursor and click with my finger instead. Apple Pencil worked perfectly for me with the last iPad version. Really frustrating :).