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How to Remove Third-Party External Agents from the Copilot Agent Store

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michaelgoad
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Sep 03, 2025

If you're starting to roll out Microsoft Copilot in your organization, you're probably exploring the Agent Store. But you might also be noticing something unexpected—third-party agents like Jira, Monday, or Dropbox showing up without your approval.

 

You're not alone. Many IT admins are seeing this and asking:
"Where did these agents come from, and how do I remove them?"

 

Here’s how to clean up your Copilot Agent Store and give your users a more curated, secure experience:

Why This Matters

  • User confusion: Users see unfamiliar agents and start submitting tickets.
  • Security concerns: Third-party agents may access data you haven’t vetted.
  • Control: You want to manage what’s available in your environment.

Steps to Remove Third-Party Agents

  1. Go to the Microsoft 365 Admin Center
    • Navigate to the Copilot section in the left-hand menu.
  2. Open Copilot Settings
    • Under the Copilot dropdown, select Settings.
  3. Go to the Data Access Tab
    • This is where you control agent visibility and access.
  4. Adjust Agent Permissions
    • Find the setting:
      “Allow apps and agents created by external publishers”
      • Uncheck this box to remove third-party agents from the store.
  5. Optional: Fine-Tune Access
    • You can also:
      • Allow or block Microsoft-created agents.
      • Allow only agents created by your organization.
      • Assign access to specific security groups.
  6. Review Agent Types
    • In the Agents section, check the Type column:
      • External = third-party
      • Microsoft = first-party
      • Shared = created by users in the Copilot web app
      • Custom = built in Copilot Studio or M365 toolkit
  7. Refresh the Agent Store
    • Go back to Copilot, refresh the page, and you’ll see the third-party agents disappear.

Final Thoughts

This quick change helps you:

  • Reduce noise in the Agent Store
  • Improve user experience
  • Maintain better control over your Copilot environment

Go push some buttons.

Updated Sep 03, 2025
Version 2.0
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