I looked into this a little bit just now. About .NET 4.8 comment, this appears to be completely unrelated to this issue. Since we are on server 2025, .NET 4.8.1 comes server 2025 by default.
We have 4 SE exchange servers with DAG setup to replicate mailboxes between all of them. On only 2 of our exchange servers I am seeing the following log over and over in these 3 log paths:
C:\Program Files\Microsoft\Exchange Server\V15\Logging\Search\NotificationsContentIndexingConnection\*.log
C:\Program Files\Microsoft\Exchange Server\V15\Logging\Search\OnSaveContentIndexingConnection\*.log
C:\Program Files\Microsoft\Exchange Server\V15\Logging\Search\RetryContentIndexingConnection\*.log
ERROR: "An error has occurred.,FailedToConnect: skip adding Poi,,,146902,2,MSExchangeMailboxAssistants.exe"
What I did as a test was migrated the mailbox DBs on one of these 2 servers to another server and reboot the exchange server. Upon rebooting, I migrated those mailboxes that have activation preference 1 back to this server and I haven't seen these error logs show back up in those log locations above and I saw the BigfunnelNotIndexedCount go down by a few hundred on one of the mailboxes on this DB .. but now it's staying at the number assuming because of all the emails flagged as PermanentFailure=true and won't be retried for reindexing?
I then ran the Troubleshoot-ModernSearch.ps1 script against one of these mailboxes and the BigfunnelNotIndexedCount is exact count match for all the emails that are stuck with PermanentFailure=true all have the same reason "FailedToConnect: skip adding Poi" on them, how do we get these to requeue and re-index?
Not sure if indexing will continue working for new emails received or if it will hit the issue again but I'm just posting what I am seeing from our exchange environment. Hopefully this helps MS with the fix